Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu-alpha | EYY78_22380 | Not Available | Positive | 4425211 - 4425483 | 9535.51 |
| duf1481 domain-containing protein | EYY78_22385 | Not Available | Positive | 4425496 - 4426191 | 26338.8 |
| zinc resistance sensor/chaperone zrap | EYY78_22390 | Not Available | Negative | 4426193 - 4426618 | 15200.3 |
| two-component system sensor histidine kinase zras | EYY78_22395 | Not Available | Positive | 4426856 - 4428232 | 50520.1 |
| sigma-54-dependent response regulator transcription factor zrar | EYY78_22400 | Not Available | Positive | 4428229 - 4429554 | 48341.3 |
| phosphoribosylamine--glycine ligase | EYY78_22405 | Not Available | Negative | 4429551 - 4430840 | 45957.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EYY78_22410 | Not Available | Negative | 4430852 - 4432441 | 57361.4 |
| hypothetical protein | EYY78_22415 | Not Available | Positive | 4432854 - 4433378 | 20032.4 |
| duf496 family protein | EYY78_22420 | Not Available | Positive | 4433550 - 4433879 | 12778.5 |
| ethanolamine utilization protein | EYY78_22425 | Not Available | Negative | 4433980 - 4434114 | 4923.94 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




