Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | EYY78_22070 | Not Available | Positive | 4362570 - 4363439 | 33222.7 |
| type vi secretion system tip protein vgrg | EYY78_22075 | Not Available | Positive | 4363440 - 4364063 | 22550.6 |
| duf1795 domain-containing protein | EYY78_22080 | Not Available | Positive | 4364091 - 4364552 | 17319.4 |
| type iv secretion protein rhs | EYY78_22085 | Not Available | Positive | 4364572 - 4368618 | 149928.0 |
| phosphoadenosine phosphosulfate reductase | EYY78_22090 | Not Available | Positive | 4368684 - 4371059 | 89623.1 |
| hypothetical protein | EYY78_22095 | Not Available | Positive | 4371249 - 4371448 | 7790.75 |
| xre family transcriptional regulator | EYY78_22100 | Not Available | Negative | 4371677 - 4371958 | 10972.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EYY78_22105 | Not Available | Negative | 4371939 - 4372268 | 12493.4 |
| duf87 domain-containing protein | EYY78_22115 | Not Available | Negative | 4372944 - 4375016 | 77593.3 |
| hypothetical protein | EYY78_22120 | Not Available | Negative | 4375013 - 4375929 | 34488.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




