Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mipa/ompv family protein | EYY78_21905 | Not Available | Positive | 4337410 - 4338150 | 27370.9 |
| l-ribulose-5-phosphate 4-epimerase | EYY78_21915 | Not Available | Negative | 4338497 - 4339192 | 25560.3 |
| l-ribulose-5-phosphate 3-epimerase | EYY78_21920 | Not Available | Negative | 4339186 - 4340046 | 32513.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | EYY78_21925 | Not Available | Negative | 4340039 - 4340701 | 23534.2 |
| l-xylulokinase | EYY78_21930 | Not Available | Negative | 4340698 - 4342194 | 55275.2 |
| 2,3-diketo-l-gulonate transporter substrate-binding protein yiao | EYY78_21935 | Not Available | Negative | 4342198 - 4343184 | 36003.1 |
| 2,3-diketo-l-gulonate transporter large permease yian | EYY78_21940 | Not Available | Negative | 4343197 - 4344474 | 45371.0 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | EYY78_21945 | Not Available | Negative | 4344477 - 4344950 | 17516.9 |
| translation initiation factor if-2 | EYY78_21950 | Not Available | Positive | 4345003 - 4345601 | 21025.9 |
| hypothetical protein | EYY78_21955 | Not Available | Positive | 4345601 - 4345794 | 7458.61 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




