Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1116 domain-containing protein | EYY78_20915 | Not Available | Negative | 4153985 - 4155403 | 50451.1 |
| acyl-coa synthetase fdra | EYY78_20920 | Not Available | Negative | 4155403 - 4156950 | 55531.1 |
| duf2877 domain-containing protein | EYY78_20925 | Not Available | Negative | 4156940 - 4157803 | 32344.7 |
| ankyrin repeat domain-containing protein | EYY78_20930 | Not Available | Negative | 4157843 - 4158448 | 21624.4 |
| duf1097 domain-containing protein | EYY78_20935 | Not Available | Positive | 4158706 - 4159203 | 17298.0 |
| lysr family transcriptional regulator | EYY78_20940 | Not Available | Positive | 4159295 - 4160227 | 34768.9 |
| eal domain-containing protein | EYY78_20945 | Not Available | Negative | 4160269 - 4161357 | 40741.3 |
| hypothetical protein | EYY78_20950 | Not Available | Negative | 4161852 - 4161926 | 2654.67 |
| choline bcct transporter bett | EYY78_20955 | Not Available | Negative | 4162232 - 4164265 | 75846.5 |
| transcriptional regulator beti | EYY78_20960 | Not Available | Positive | 4164394 - 4164981 | 21792.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




