Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc transporter permease lptg | EYY78_20815 | Not Available | Negative | 4131695 - 4132777 | 39621.0 |
| lipopolysaccharide abc transporter permease lptf | EYY78_20820 | Not Available | Negative | 4132777 - 4133877 | 40360.1 |
| leucyl aminopeptidase | EYY78_20825 | Not Available | Positive | 4134144 - 4135655 | 54883.1 |
| dna polymerase iii subunit chi | EYY78_20830 | Not Available | Positive | 4135750 - 4136232 | 18119.3 |
| valine--trna ligase | EYY78_20835 | Not Available | Positive | 4136232 - 4139087 | 108198.0 |
| duf898 domain-containing protein | EYY78_20840 | Not Available | Negative | 4139143 - 4140339 | 44901.2 |
| gnat family n-acetyltransferase | EYY78_20845 | Not Available | Positive | 4140533 - 4141036 | 18609.4 |
| ribonuclease e inhibitor rrab | EYY78_20850 | Not Available | Negative | 4141082 - 4141498 | 15603.5 |
| ornithine carbamoyltransferase | EYY78_20855 | Not Available | Positive | 4141660 - 4142664 | 36865.1 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | EYY78_20860 | Not Available | Positive | 4143008 - 4144324 | 48450.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




