Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein transport protein hofc | EYY78_20715 | Not Available | Positive | 4116452 - 4117654 | 44418.2 |
| gmp reductase | EYY78_20720 | Not Available | Negative | 4117689 - 4118732 | 37385.8 |
| dephospho-coa kinase | EYY78_20725 | Not Available | Positive | 4118957 - 4119577 | 22667.0 |
| cell division protein zapd | EYY78_20730 | Not Available | Positive | 4119577 - 4120320 | 28293.3 |
| dna gyrase inhibitor yacg | EYY78_20735 | Not Available | Positive | 4120330 - 4120527 | 7306.49 |
| hypothetical protein | EYY78_20740 | Not Available | Negative | 4120803 - 4121087 | 11144.6 |
| hypothetical protein | EYY78_20745 | Not Available | Negative | 4121370 - 4121810 | 16801.7 |
| hypothetical protein | EYY78_20750 | Not Available | Positive | 4121763 - 4122185 | 16503.3 |
| head decoration protein | EYY78_20755 | Not Available | Negative | 4122461 - 4122790 | 11673.9 |
| major capsid protein | EYY78_20760 | Not Available | Negative | 4122801 - 4123856 | 39111.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




