Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | EYY78_20660 | Not Available | Positive | 4107312 - 4108493 | 43263.9 |
| amino acid abc transporter permease | EYY78_20665 | Not Available | Positive | 4108503 - 4109606 | 41512.7 |
| amino acid abc transporter atp-binding protein | EYY78_20670 | Not Available | Positive | 4109614 - 4110372 | 28564.0 |
| Trna-thr | Not Available | Not Available | Positive | 4110590 - 4110665 | Not Available |
| aromatic amino acid transporter arop | EYY78_20685 | Not Available | Positive | 4110692 - 4111998 | 46965.7 |
| beta-lactamase regulator ampe | EYY78_20690 | Not Available | Negative | 4112041 - 4112895 | 32123.9 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EYY78_20695 | Not Available | Negative | 4112892 - 4113443 | 20537.2 |
| carboxylating nicotinate-nucleotide diphosphorylase | EYY78_20700 | Not Available | Positive | 4113531 - 4114424 | 32764.0 |
| prepilin peptidase-dependent pilin | EYY78_20705 | Not Available | Positive | 4114627 - 4115067 | 15622.7 |
| type ii secretion system protein gspe | EYY78_20710 | Not Available | Positive | 4115077 - 4116462 | 50455.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




