Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 methyltransferase | EYY78_20610 | Not Available | Positive | 4096247 - 4097128 | 31878.8 |
| trna dihydrouridine synthase dusb | EYY78_20615 | Not Available | Positive | 4097457 - 4098422 | 35868.2 |
| dna-binding transcriptional regulator fis | EYY78_20620 | Not Available | Positive | 4098448 - 4098744 | 11240.6 |
| adenine-specific dna-methyltransferase | EYY78_20625 | Not Available | Positive | 4098830 - 4099714 | 33371.2 |
| duf2556 domain-containing protein | EYY78_20630 | Not Available | Positive | 4099798 - 4099977 | 7233.96 |
| multidrug efflux transporter transcriptional repressor acrs | EYY78_20635 | Not Available | Negative | 4099980 - 4100642 | 25184.7 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acre | EYY78_20640 | Not Available | Positive | 4101041 - 4102198 | 41320.0 |
| multidrug efflux rnd transporter permease subunit acrf | EYY78_20645 | Not Available | Positive | 4102210 - 4105314 | 111507.0 |
| hypothetical protein | EYY78_20650 | Not Available | Positive | 4105567 - 4105788 | 7452.14 |
| amino acid abc transporter substrate-binding protein | EYY78_20655 | Not Available | Positive | 4106219 - 4107244 | 37034.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




