Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylsulfoxide reductase subunit a | EYY78_09860 | Not Available | Positive | 1969504 - 1971948 | 90375.6 |
| dimethylsulfoxide reductase subunit b | EYY78_09865 | Not Available | Positive | 1971959 - 1972576 | 22870.1 |
| dimethyl sulfoxide reductase | EYY78_09870 | Not Available | Positive | 1972578 - 1973441 | 30862.2 |
| hydrolase | EYY78_09875 | Not Available | Negative | 1973477 - 1974103 | 23089.5 |
| mfs transporter | EYY78_09880 | Not Available | Positive | 1974418 - 1975566 | 41446.2 |
| amino acid permease | EYY78_09885 | Not Available | Positive | 1975776 - 1977206 | 52499.5 |
| lysr family transcriptional regulator | EYY78_09890 | Not Available | Negative | 1977207 - 1978115 | 34260.3 |
| nad(p)h oxidoreductase | EYY78_09895 | Not Available | Positive | 1978215 - 1978805 | 23027.3 |
| pyruvate formate lyase 1-activating protein | EYY78_09900 | Not Available | Negative | 1978887 - 1979627 | 28205.9 |
| formate c-acetyltransferase | EYY78_09905 | Not Available | Negative | 1979819 - 1982101 | 85362.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




