Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | EYY78_09810 | Not Available | Negative | 1954657 - 1954875 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | EYY78_09815 | Not Available | Negative | 1955160 - 1955864 | 26620.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | EYY78_09820 | Not Available | Negative | 1955906 - 1957627 | 62881.1 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | EYY78_09825 | Not Available | Negative | 1957628 - 1959394 | 65046.0 |
| thioredoxin-disulfide reductase | EYY78_09830 | Not Available | Negative | 1959517 - 1960482 | 34625.1 |
| leucine-responsive transcriptional regulator lrp | EYY78_09835 | Not Available | Positive | 1961027 - 1961521 | 18887.9 |
| dna translocase ftsk | EYY78_09840 | Not Available | Positive | 1961656 - 1965762 | 151076.0 |
| outer membrane lipoprotein chaperone lola | EYY78_09845 | Not Available | Positive | 1965917 - 1966528 | 22498.2 |
| replication-associated recombination protein a | EYY78_09850 | Not Available | Positive | 1966539 - 1967882 | 49597.8 |
| serine--trna ligase | EYY78_09855 | Not Available | Positive | 1967973 - 1969265 | 48416.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




