Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaeq family protein | EYY78_09700 | Not Available | Positive | 1932986 - 1933531 | 20877.7 |
| aminoacyl-trna hydrolase | EYY78_09705 | Not Available | Positive | 1933528 - 1933950 | 15577.9 |
| envelope stress response activation lipoprotein nlpe | EYY78_09710 | Not Available | Positive | 1933964 - 1934674 | 25885.8 |
| proline--trna ligase | EYY78_09720 | Not Available | Negative | 1935706 - 1937424 | 63543.1 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EYY78_09725 | Not Available | Negative | 1937536 - 1938243 | 26363.8 |
| rcs stress response system protein rcsf | EYY78_09730 | Not Available | Negative | 1938240 - 1938644 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | EYY78_09735 | Not Available | Negative | 1938762 - 1939577 | 29419.2 |
| methionine abc transporter | EYY78_09740 | Not Available | Negative | 1939617 - 1940270 | 23257.6 |
| d-methionine abc transporter, atp-binding protein | EYY78_09745 | Not Available | Negative | 1940263 - 1941294 | 37804.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | EYY78_09750 | Not Available | Positive | 1941482 - 1942057 | 21295.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




