Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | EYY78_09535 | Not Available | Negative | 1895865 - 1896929 | 39267.1 |
| dgtpase | EYY78_09555 | Not Available | Positive | 1899414 - 1900165 | 29299.9 |
| serine endoprotease degp | EYY78_09560 | Not Available | Positive | 1900295 - 1901719 | 49357.3 |
| cdar family transcriptional regulator | EYY78_09565 | Not Available | Positive | 1901874 - 1903031 | 43660.1 |
| duf3461 family protein | EYY78_09570 | Not Available | Negative | 1903120 - 1903506 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EYY78_09575 | Not Available | Negative | 1903818 - 1904642 | 29893.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EYY78_09580 | Not Available | Negative | 1904673 - 1907345 | 102402.0 |
| type i methionyl aminopeptidase | EYY78_09585 | Not Available | Negative | 1907407 - 1908201 | 29332.5 |
| 30s ribosomal protein s2 | EYY78_09590 | Not Available | Positive | 1908569 - 1909294 | 26759.2 |
| elongation factor ts | EYY78_09595 | Not Available | Positive | 1909552 - 1910403 | 30424.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




