Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase a | EYY78_09480 | Not Available | Negative | 1881717 - 1882289 | 20432.5 |
| mfs transporter tsga | EYY78_09485 | Not Available | Positive | 1882560 - 1883741 | 43169.0 |
| nitrite reductase large subunit | EYY78_09495 | Not Available | Positive | 1884003 - 1886546 | 93112.6 |
| nitrite reductase small subunit nird | EYY78_09500 | Not Available | Positive | 1886543 - 1886869 | 12311.7 |
| nitrite transporter nirc | EYY78_09505 | Not Available | Positive | 1886996 - 1887802 | 28624.2 |
| uroporphyrinogen-iii c-methyltransferase | EYY78_09510 | Not Available | Positive | 1887821 - 1889194 | 49954.4 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | EYY78_09515 | Not Available | Positive | 1889632 - 1892055 | 92211.9 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | EYY78_09520 | Not Available | Positive | 1892064 - 1894082 | 77416.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | EYY78_09525 | Not Available | Positive | 1894075 - 1895400 | 50768.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | EYY78_09530 | Not Available | Positive | 1895402 - 1895815 | 16054.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




