Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cidb/lrgb family autolysis modulator | EYY78_09070 | Not Available | Positive | 1811469 - 1812164 | 24471.1 |
| cytidine deaminase | EYY78_09075 | Not Available | Positive | 1812294 - 1813178 | 31541.6 |
| outer membrane permeability protein sana | EYY78_09080 | Not Available | Positive | 1813328 - 1814047 | 27288.5 |
| duf2542 family protein | EYY78_09085 | Not Available | Positive | 1814050 - 1814289 | 9264.61 |
| is66 family insertion sequence hypothetical protein | EYY78_09090 | Not Available | Negative | 1814299 - 1814373 | 2709.35 |
| is66 family insertion sequence hypothetical protein | EYY78_09095 | Not Available | Negative | 1814370 - 1814684 | 11501.6 |
| transposase | EYY78_09105 | Not Available | Negative | 1815545 - 1815895 | 13517.4 |
| type i restriction endonuclease subunit r | EYY78_09115 | Not Available | Negative | 1816116 - 1819133 | 114683.0 |
| duf4268 domain-containing protein | EYY78_09120 | Not Available | Negative | 1819148 - 1820311 | 44403.0 |
| restriction endonuclease subunit s | EYY78_09125 | Not Available | Negative | 1820321 - 1821586 | 47631.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




