Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY78_08870 | Not Available | Positive | 1764128 - 1764331 | 7177.59 |
| diaminopimelate epimerase | EYY78_08875 | Not Available | Positive | 1764368 - 1765192 | 30210.4 |
| duf484 domain-containing protein | EYY78_08880 | Not Available | Positive | 1765189 - 1765896 | 26730.4 |
| tyrosine recombinase xerc | EYY78_08885 | Not Available | Positive | 1765893 - 1766789 | 33869.7 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | EYY78_08890 | Not Available | Positive | 1766789 - 1767505 | 27123.4 |
| dna helicase ii | EYY78_08895 | Not Available | Positive | 1767589 - 1769751 | 81994.7 |
| phosphodiester glycosidase family protein | EYY78_08900 | Not Available | Negative | 1769898 - 1770662 | 28085.3 |
| magnesium/cobalt transporter cora | EYY78_08905 | Not Available | Positive | 1771032 - 1771982 | 36591.8 |
| duf943 family protein | EYY78_08910 | Not Available | Negative | 1772024 - 1772515 | 19574.3 |
| duf3289 family protein | EYY78_08915 | Not Available | Negative | 1772512 - 1772676 | 6816.07 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




