Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | EYY78_08770 | Not Available | Positive | 1739170 - 1740507 | 46847.8 |
| nad(p)h-dependent chromate oxidoreductase yief | EYY78_08775 | Not Available | Negative | 1740561 - 1741127 | 20362.8 |
| hypothetical protein | EYY78_08780 | Not Available | Negative | 1741149 - 1741898 | 27664.2 |
| hth-type transcriptional regulator yidz | EYY78_08785 | Not Available | Negative | 1742055 - 1743014 | 36930.9 |
| multidrug efflux mfs transporter mdtl | EYY78_08790 | Not Available | Negative | 1742989 - 1744164 | 41508.2 |
| low affinity tryptophan permease tnab | EYY78_08795 | Not Available | Negative | 1744297 - 1745544 | 45193.2 |
| tryptophanase | EYY78_08800 | Not Available | Negative | 1745635 - 1747050 | 52776.4 |
| duf2517 family protein | EYY78_08805 | Not Available | Negative | 1747414 - 1747620 | 8275.0 |
| k(+)-transporting atpase subunit f | EYY78_08810 | Not Available | Positive | 1747933 - 1748022 | 3071.95 |
| potassium-transporting atpase subunit kdpa | EYY78_08815 | Not Available | Positive | 1748022 - 1749695 | 59173.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




