Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phop regulatory network protein yrbl | EYY78_08270 | Not Available | Positive | 1631012 - 1631644 | 24373.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EYY78_08275 | Not Available | Negative | 1631641 - 1632369 | 27343.1 |
| isoprenoid biosynthesis glyoxalase elbb | EYY78_08280 | Not Available | Negative | 1632366 - 1633019 | 22984.9 |
| aerobic respiration two-component sensor histidine kinase arcb | EYY78_08285 | Not Available | Negative | 1633249 - 1635585 | 87988.0 |
| tigr01212 family radical sam protein | EYY78_08290 | Not Available | Negative | 1635681 - 1636610 | 34680.6 |
| glutamate synthase large subunit | EYY78_08295 | Not Available | Positive | 1637285 - 1641745 | 163320.0 |
| glutamate synthase | EYY78_08300 | Not Available | Positive | 1641758 - 1643176 | 52018.3 |
| duf1016 domain-containing protein | EYY78_08305 | Not Available | Positive | 1643360 - 1644487 | 43528.1 |
| yhch/yjgk/yial family protein | EYY78_08310 | Not Available | Negative | 1644547 - 1645011 | 17038.7 |
| rok family protein | EYY78_08315 | Not Available | Negative | 1645008 - 1645883 | 29657.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




