Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | EYY78_08120 | Not Available | Negative | 1606770 - 1607618 | 30616.9 |
| atp-dependent zinc metalloprotease ftsh | EYY78_08125 | Not Available | Negative | 1607708 - 1609642 | 70712.3 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | EYY78_08130 | Not Available | Negative | 1609742 - 1610371 | 23336.4 |
| ribosome assembly rna-binding protein yhby | EYY78_08135 | Not Available | Positive | 1610497 - 1610790 | 10784.4 |
| transcription elongation factor grea | EYY78_08140 | Not Available | Negative | 1610946 - 1611422 | 17642.0 |
| serine-type d-ala-d-ala carboxypeptidase | EYY78_08145 | Not Available | Positive | 1611670 - 1613103 | 51787.3 |
| gtpase obge | EYY78_08150 | Not Available | Negative | 1613143 - 1614315 | 43230.2 |
| dmt family transporter | EYY78_08155 | Not Available | Negative | 1614331 - 1615296 | 34965.2 |
| 50s ribosomal protein l27 | EYY78_08160 | Not Available | Negative | 1615423 - 1615680 | 9125.01 |
| 50s ribosomal protein l21 | EYY78_08165 | Not Available | Negative | 1615701 - 1616012 | 11565.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




