Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribokinase | EYY78_07505 | Not Available | Positive | 1511465 - 1512394 | 32292.4 |
| transcriptional regulator rbsr | EYY78_07510 | Not Available | Positive | 1512398 - 1513390 | 36587.1 |
| dha2 family efflux mfs transporter permease subunit | EYY78_07515 | Not Available | Negative | 1513356 - 1514783 | 51445.9 |
| fadr family transcriptional regulator | EYY78_07520 | Not Available | Negative | 1514806 - 1515498 | 26063.5 |
| fumarate hydratase fumd | EYY78_07525 | Not Available | Negative | 1516001 - 1516210 | 7907.85 |
| pyruvate kinase i | EYY78_07530 | Not Available | Positive | 1516767 - 1518179 | 50732.5 |
| major outer membrane lipoprotein | EYY78_07535 | Not Available | Positive | 1518490 - 1518726 | 8323.95 |
| lysm peptidoglycan-binding domain-containing protein | EYY78_07540 | Not Available | Negative | 1518790 - 1519794 | 36086.4 |
| cysteine desulfuration protein sufe | EYY78_07545 | Not Available | Negative | 1519943 - 1520359 | 15801.2 |
| cysteine desulfurase sufs | EYY78_07550 | Not Available | Negative | 1520372 - 1521592 | 44379.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




