Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculokinase | EYY78_06975 | Not Available | Negative | 1425369 - 1426787 | 52201.5 |
| l-fucose isomerase | EYY78_06980 | Not Available | Negative | 1426896 - 1428671 | 65010.3 |
| l-fucose-proton symporter | EYY78_06985 | Not Available | Negative | 1428704 - 1430020 | 47547.6 |
| duf2612 domain-containing protein | EYY78_06990 | Not Available | Positive | 1430344 - 1431003 | 23868.2 |
| tail fiber assembly protein | EYY78_07000 | Not Available | Positive | 1431800 - 1432246 | 16701.4 |
| tail fiber assembly protein | EYY78_07010 | Not Available | Positive | 1433045 - 1433647 | 21770.3 |
| tail fiber assembly protein | EYY78_07015 | Not Available | Negative | 1433619 - 1434059 | 16477.4 |
| conjugal transfer protein trbc | EYY78_07020 | Not Available | Positive | 1434133 - 1434399 | 10322.2 |
| relaxase nikb | EYY78_07025 | Not Available | Negative | 1434436 - 1437135 | 104017.0 |
| nika protein | EYY78_07030 | Not Available | Negative | 1437146 - 1437478 | 12614.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




