Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein transglycosylase a | EYY78_06925 | Not Available | Positive | 1417239 - 1418336 | 40412.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | EYY78_06930 | Not Available | Positive | 1418413 - 1419219 | 28563.6 |
| cysteine desulfurase sulfur acceptor subunit csde | EYY78_06935 | Not Available | Negative | 1419270 - 1419713 | 15955.2 |
| cysteine desulfurase csda | EYY78_06940 | Not Available | Negative | 1419713 - 1420918 | 43236.6 |
| ygdi/ygdr family lipoprotein | EYY78_06945 | Not Available | Positive | 1421110 - 1421337 | 8174.67 |
| transcriptional regulator gcva | EYY78_06950 | Not Available | Positive | 1421688 - 1422605 | 34403.4 |
| duf423 domain-containing protein | EYY78_06955 | Not Available | Positive | 1422624 - 1423019 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | EYY78_06960 | Not Available | Positive | 1423012 - 1424112 | 41907.5 |
| l-fucose operon activator | EYY78_06965 | Not Available | Negative | 1424156 - 1424887 | 27363.7 |
| l-fucose mutarotase | EYY78_06970 | Not Available | Negative | 1424945 - 1425367 | 15474.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




