Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | EYY78_06825 | Not Available | Negative | 1400121 - 1400549 | 15372.0 |
| fimbrial protein | EYY78_06830 | Not Available | Negative | 1400500 - 1400616 | 4360.32 |
| fimbrial protein | EYY78_06835 | Not Available | Negative | 1400588 - 1401094 | 17632.3 |
| fimbrial protein | EYY78_06840 | Not Available | Negative | 1401111 - 1401863 | 27693.3 |
| fimbrial biogenesis outer membrane usher protein | EYY78_06845 | Not Available | Negative | 1401883 - 1404525 | 97404.5 |
| type 1 fimbrial protein | EYY78_06850 | Not Available | Negative | 1404607 - 1405170 | 19869.3 |
| stress response membrane protein yncl | EYY78_06855 | Not Available | Negative | 1405509 - 1405604 | 3490.44 |
| ghot/ortt family toxin | EYY78_06860 | Not Available | Positive | 1405799 - 1405972 | 6646.44 |
| duf2526 domain-containing protein | EYY78_06865 | Not Available | Positive | 1406058 - 1406291 | 8800.41 |
| dmt family transporter | EYY78_06870 | Not Available | Negative | 1406292 - 1406741 | 15856.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




