Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfbu family protein | EYY78_06625 | Not Available | Negative | 1361531 - 1362025 | 19537.4 |
| duf412 domain-containing protein | EYY78_06630 | Not Available | Negative | 1362108 - 1362563 | 17214.1 |
| acetate kinase | EYY78_06635 | Not Available | Positive | 1362901 - 1364103 | 43293.0 |
| phosphate acetyltransferase | EYY78_06640 | Not Available | Positive | 1364178 - 1366322 | 77176.6 |
| putative basic amino acid antiporter yfcc | EYY78_06645 | Not Available | Positive | 1366512 - 1368032 | 54781.0 |
| nudix hydrolase yfcd | EYY78_06650 | Not Available | Negative | 1368065 - 1368607 | 20376.9 |
| phosphodiesterase | EYY78_06655 | Not Available | Negative | 1368665 - 1369216 | 19992.1 |
| glutathione transferase | EYY78_06660 | Not Available | Negative | 1369272 - 1369916 | 24298.9 |
| gsh-dependent disulfide bond oxidoreductase | EYY78_06665 | Not Available | Positive | 1370052 - 1370699 | 24517.2 |
| dihydroneopterin triphosphate 2'-epimerase | EYY78_06670 | Not Available | Positive | 1370756 - 1371118 | 14082.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




