Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY78_06575 | Not Available | Positive | 1349392 - 1349634 | 9244.94 |
| formate dehydrogenase accessory protein fdhe | EYY78_06580 | Not Available | Negative | 1349988 - 1350917 | 34690.5 |
| formate dehydrogenase cytochrome b556 subunit | EYY78_06585 | Not Available | Negative | 1350914 - 1351549 | 24607.7 |
| formate dehydrogenase subunit beta | EYY78_06590 | Not Available | Negative | 1351546 - 1352448 | 33102.1 |
| formate dehydrogenase-n subunit alpha | EYY78_06595 | Not Available | Negative | 1352461 - 1355511 | 112446.0 |
| sulfurtransferase fdhd | EYY78_06600 | Not Available | Positive | 1355705 - 1356538 | 30533.8 |
| pyridoxal phosphate-dependent aminotransferase | EYY78_06605 | Not Available | Positive | 1356992 - 1358209 | 45519.9 |
| 5'-deoxynucleotidase | EYY78_06610 | Not Available | Positive | 1358293 - 1358892 | 22695.3 |
| slc13 family permease | EYY78_06615 | Not Available | Negative | 1358951 - 1360783 | 65876.0 |
| hexitol phosphatase hpxa | EYY78_06620 | Not Available | Negative | 1360870 - 1361520 | 23035.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




