Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock chaperone ibpb | EYY78_06370 | Not Available | Negative | 1315317 - 1315745 | 16094.1 |
| heat shock chaperone ibpa | EYY78_06375 | Not Available | Negative | 1315857 - 1316270 | 15774.6 |
| ycek/yidq family lipoprotein | EYY78_06380 | Not Available | Positive | 1316576 - 1316908 | 11826.3 |
| duf3748 domain-containing protein | EYY78_06385 | Not Available | Negative | 1316910 - 1318157 | 46116.0 |
| colicin m resistance protein | EYY78_06390 | Not Available | Positive | 1318225 - 1319289 | 40146.6 |
| mfs transporter | EYY78_06395 | Not Available | Negative | 1319286 - 1320578 | 47079.4 |
| galactonate dehydratase | EYY78_06400 | Not Available | Negative | 1320698 - 1321846 | 42539.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EYY78_06405 | Not Available | Negative | 1321843 - 1322460 | 21418.8 |
| 2-dehydro-3-deoxygalactonokinase | EYY78_06410 | Not Available | Negative | 1322444 - 1323322 | 31386.3 |
| fadr family transcriptional regulator | EYY78_06415 | Not Available | Negative | 1323319 - 1324005 | 25952.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




