Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| appa family phytase/histidine-type acid phosphatase | EYY78_05445 | Not Available | Negative | 1125125 - 1126423 | 47001.5 |
| cytochrome bd-ii oxidase subunit cbdx | EYY78_05450 | Not Available | Negative | 1126503 - 1126595 | 3597.68 |
| cytochrome d ubiquinol oxidase subunit ii | EYY78_05455 | Not Available | Negative | 1126608 - 1127744 | 42412.3 |
| cytochrome bd-ii oxidase subunit 1 | EYY78_05460 | Not Available | Negative | 1127756 - 1129300 | 57996.3 |
| hydrogenase expression/formation protein | EYY78_05465 | Not Available | Negative | 1129434 - 1130291 | 31432.5 |
| hydrogenase-1 operon protein hyae | EYY78_05470 | Not Available | Negative | 1130288 - 1130686 | 14890.6 |
| hydrogenase 1 maturation protease | EYY78_05475 | Not Available | Negative | 1130683 - 1131270 | 21547.7 |
| ni/fe-hydrogenase b-type cytochrome subunit | EYY78_05480 | Not Available | Negative | 1131267 - 1131974 | 27628.9 |
| ni/fe-hydrogenase large subunit | EYY78_05485 | Not Available | Negative | 1131993 - 1133786 | 66285.1 |
| hydrogenase 1 small subunit | EYY78_05490 | Not Available | Negative | 1133783 - 1134901 | 40653.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




