Pseudoxanthomonas winnipegensis strain NML 130969

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas winnipegensis strain NML 130969 is characterized as a rod-shaped bacterium. This strain features a single replicon, indicating a streamlined genomic organization that may influence its replication and genetic stability. It has been identified as a host-associated bacterium, with Homo sapiens being its recognized host. The strain is cataloged under the accession number SHMG00000000.1, which provides a unique identifier for its genomic sequence and related data. Such accession numbers are crucial for researchers looking to access genetic information, facilitating studies on its biological functions and potential applications. The association of Pseudoxanthomonas winnipegensis with humans suggests potential implications for microbial interactions within the human body, which could range from symbiotic relationships to opportunistic behaviors. Understanding the ecological role of this strain may provide insights into its impact on human health or its potential utility in biotechnological applications. Further research could elucidate the specific functions and interactions of this bacterium within human-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas winnipegensis
Strainstrain NML 130969

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas winnipegensis strain NML 130969 NML130969_25,

Gene Summary

Adenine Count

719825 bp

Thymine Count

730452 bp

Guanine Count

1607174 bp

Cytosine Count

1597601 bp

Genome Length

4655052 bp

Protein-coding Genes

3981 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeEA655_02955Not AvailableNegative691185 - 69181723426.3
ribosome assembly rna-binding protein yhbyEA655_02960Not AvailablePositive691918 - 69222311132.7
hypothetical proteinEA655_02965Not AvailablePositive692285 - 69265912962.6
lysm peptidoglycan-binding domain-containing proteinEA655_02970Not AvailableNegative692952 - 69375227406.7
deda family proteinEA655_02975Not AvailableNegative693761 - 69437522102.8
protein-l-isoaspartate(d-aspartate) o-methyltransferaseEA655_02980Not AvailableNegative694375 - 69505824170.3
5'/3'-nucleotidase sureEA655_02985Not AvailableNegative695055 - 69583427538.5
smr domain proteinEA655_02990Not AvailablePositive695925 - 69645819004.7
glutathione s-transferase family proteinEA655_02995Not AvailablePositive696702 - 69738825664.8
trna pseudouridine(13) synthase trudEA655_03000Not AvailableNegative697410 - 69849839475.0

Displaying genes 701 – 710 of 4108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.