Pseudoxanthomonas winnipegensis strain NML 130969

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas winnipegensis strain NML 130969 is characterized as a rod-shaped bacterium. This strain features a single replicon, indicating a streamlined genomic organization that may influence its replication and genetic stability. It has been identified as a host-associated bacterium, with Homo sapiens being its recognized host. The strain is cataloged under the accession number SHMG00000000.1, which provides a unique identifier for its genomic sequence and related data. Such accession numbers are crucial for researchers looking to access genetic information, facilitating studies on its biological functions and potential applications. The association of Pseudoxanthomonas winnipegensis with humans suggests potential implications for microbial interactions within the human body, which could range from symbiotic relationships to opportunistic behaviors. Understanding the ecological role of this strain may provide insights into its impact on human health or its potential utility in biotechnological applications. Further research could elucidate the specific functions and interactions of this bacterium within human-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas winnipegensis
Strainstrain NML 130969

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas winnipegensis strain NML 130969 NML130969_25,

Gene Summary

Adenine Count

719825 bp

Thymine Count

730452 bp

Guanine Count

1607174 bp

Cytosine Count

1597601 bp

Genome Length

4655052 bp

Protein-coding Genes

3981 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase assembly factor 2 family proteinEA655_01670Not AvailableNegative388647 - 38891310578.5
succinate dehydrogenase iron-sulfur subunitEA655_01675Not AvailableNegative388985 - 38976429273.2
succinate dehydrogenase flavoprotein subunitEA655_01680Not AvailableNegative389875 - 39166865188.4
succinate dehydrogenase, hydrophobic membrane anchor proteinEA655_01685Not AvailableNegative391676 - 39205613938.3
succinate dehydrogenase, cytochrome b556 subunitEA655_01690Not AvailableNegative392053 - 39244814115.4
duf1674 domain-containing proteinEA655_01695Not AvailableNegative392522 - 3926745550.42
folate-binding proteinEA655_01700Not AvailablePositive392696 - 39357431462.9
transglutaminaseEA655_01710Not AvailableNegative394332 - 39638074315.2
duf3857 domain-containing proteinEA655_01715Not AvailableNegative396387 - 39694420596.4
glycine zipper 2tm domain-containing proteinEA655_01720Not AvailableNegative397147 - 39797128602.5

Displaying genes 451 – 460 of 4108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.