Spiribacter vilamensis strain DSM 21056

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Spiribacter

Description

Spiribacter vilamensis strain DSM 21056 is characterized by having a single replicon, which indicates a streamlined genome structure. The strain is cataloged under the accession number SHLI00000000.1, reflecting its inclusion in genomic databases for further research and analysis. This bacterium belongs to the genus Spiribacter, which is known for its unique adaptations to specific ecological niches. The presence of a single replicon suggests a potentially efficient replication process, which may contribute to its survival in its native habitat. While specific ecological roles or interactions of Spiribacter vilamensis are not detailed, species within the Spiribacter genus are often associated with aquatic environments, where they may play roles in nutrient cycling or microbial community dynamics. Understanding the genomic features of Spiribacter vilamensis, such as its single replicon, can provide insights into its evolutionary adaptations and ecological functions. Further studies may reveal the specific environmental conditions that favor its growth and the ecological implications of its presence within microbial communities. Overall, the genomic simplicity of this strain may be indicative of specialized life strategies, making it a subject of interest for studies on microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusSpiribacter
SpeciesSpiribacter vilamensis
Strainstrain DSM 21056

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of a hypersaline lake located in Laguna Vilama, Argentina
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiribacter vilamensis strain DSM 21056 Ga0310522_12, whole genome

Gene Summary

Adenine Count

370600 bp

Thymine Count

372396 bp

Guanine Count

667060 bp

Cytosine Count

665965 bp

Genome Length

2076021 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef)-like proteinEV698_0919Not AvailableNegative922728 - 92464168323.2
betaine-homocysteine s-methyltransferaseEV698_0920Not AvailableNegative924641 - 92569038720.1
Trna-proNot AvailableNot AvailablePositive925840 - 925916Not Available
merr family transcriptional regulatorEV698_0922Not AvailableNegative925976 - 92633213748.5
integration host factor subunit alphaEV698_0923Not AvailableNegative926313 - 92661211176.3
phenylalanyl-trna synthetase beta subunitEV698_0924Not AvailableNegative926620 - 92899885476.0
phenylalanyl-trna synthetase alpha subunitEV698_0925Not AvailableNegative929008 - 93002737711.7
lsu ribosomal protein l20pEV698_0926Not AvailableNegative930102 - 93045813356.5
lsu ribosomal protein l35pEV698_0927Not AvailableNegative930487 - 9306847620.54
translation initiation factor 3 (bif-3)EV698_0929Not AvailableNegative930760 - 93122417631.3

Displaying genes 911 – 920 of 2035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.