Spiribacter vilamensis strain DSM 21056

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Spiribacter

Description

Spiribacter vilamensis strain DSM 21056 is characterized by having a single replicon, which indicates a streamlined genome structure. The strain is cataloged under the accession number SHLI00000000.1, reflecting its inclusion in genomic databases for further research and analysis. This bacterium belongs to the genus Spiribacter, which is known for its unique adaptations to specific ecological niches. The presence of a single replicon suggests a potentially efficient replication process, which may contribute to its survival in its native habitat. While specific ecological roles or interactions of Spiribacter vilamensis are not detailed, species within the Spiribacter genus are often associated with aquatic environments, where they may play roles in nutrient cycling or microbial community dynamics. Understanding the genomic features of Spiribacter vilamensis, such as its single replicon, can provide insights into its evolutionary adaptations and ecological functions. Further studies may reveal the specific environmental conditions that favor its growth and the ecological implications of its presence within microbial communities. Overall, the genomic simplicity of this strain may be indicative of specialized life strategies, making it a subject of interest for studies on microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusSpiribacter
SpeciesSpiribacter vilamensis
Strainstrain DSM 21056

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of a hypersaline lake located in Laguna Vilama, Argentina
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiribacter vilamensis strain DSM 21056 Ga0310522_12, whole genome

Gene Summary

Adenine Count

370600 bp

Thymine Count

372396 bp

Guanine Count

667060 bp

Cytosine Count

665965 bp

Genome Length

2076021 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
[protein release factor]-glutamine n5-methyltransferaseEV698_0082Not AvailableNegative71332 - 7218331001.6
uncharacterized protein ybar (trm112 family)EV698_0083Not AvailableNegative72180 - 7244610031.1
3-deoxy-d-arabinoheptulosonate-7-phosphate synthaseEV698_0084Not AvailablePositive72581 - 7365438572.9
trar/dksa family transcriptional regulatorEV698_0085Not AvailablePositive73694 - 7412516763.7
peptide chain release factor 1 (brf-1)EV698_0086Not AvailableNegative74150 - 7523840480.5
glutamyl-trna reductaseEV698_0087Not AvailableNegative75235 - 7651247306.6
tetratricopeptide repeat proteinEV698_0088Not AvailablePositive76585 - 7807554481.0
outer membrane lipoprotein lolbEV698_0089Not AvailablePositive78072 - 7868322450.6
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseEV698_0090Not AvailablePositive78680 - 7954930823.7
Trna-glnNot AvailableNot AvailablePositive79540 - 79611Not Available

Displaying genes 81 – 90 of 2035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.