Spiribacter vilamensis strain DSM 21056

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Spiribacter

Description

Spiribacter vilamensis strain DSM 21056 is characterized by having a single replicon, which indicates a streamlined genome structure. The strain is cataloged under the accession number SHLI00000000.1, reflecting its inclusion in genomic databases for further research and analysis. This bacterium belongs to the genus Spiribacter, which is known for its unique adaptations to specific ecological niches. The presence of a single replicon suggests a potentially efficient replication process, which may contribute to its survival in its native habitat. While specific ecological roles or interactions of Spiribacter vilamensis are not detailed, species within the Spiribacter genus are often associated with aquatic environments, where they may play roles in nutrient cycling or microbial community dynamics. Understanding the genomic features of Spiribacter vilamensis, such as its single replicon, can provide insights into its evolutionary adaptations and ecological functions. Further studies may reveal the specific environmental conditions that favor its growth and the ecological implications of its presence within microbial communities. Overall, the genomic simplicity of this strain may be indicative of specialized life strategies, making it a subject of interest for studies on microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusSpiribacter
SpeciesSpiribacter vilamensis
Strainstrain DSM 21056

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of a hypersaline lake located in Laguna Vilama, Argentina
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiribacter vilamensis strain DSM 21056 Ga0310522_12, whole genome

Gene Summary

Adenine Count

370600 bp

Thymine Count

372396 bp

Guanine Count

667060 bp

Cytosine Count

665965 bp

Genome Length

2076021 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter membrane protein 1 (paat family)EV698_0483Not AvailableNegative473788 - 47497542301.4
amino acid abc transporter substrate-binding protein (paat family)EV698_0484Not AvailableNegative475066 - 47608536328.2
alcohol dehydrogenase class ivEV698_0485Not AvailablePositive476301 - 47744339639.6
trap-type mannitol/chloroaromatic compound transport system permease small subunitEV698_0486Not AvailablePositive477490 - 47801419063.2
tripartite atp-independent transporter dctm subunitEV698_0487Not AvailablePositive478014 - 47938448380.4
secreted proteinEV698_0488Not AvailableNegative479389 - 48047139846.6
uncharacterized protein (duf1778 family)EV698_0489Not AvailablePositive480636 - 48094111290.2
acetyltransferase (gnat) family proteinEV698_0490Not AvailablePositive480958 - 48148519260.9
biotin transport system substrate-specific componentEV698_0491Not AvailablePositive481627 - 48219019469.4
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)EV698_0492Not AvailablePositive482202 - 48315534088.3

Displaying genes 481 – 490 of 2035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.