Spiribacter vilamensis strain DSM 21056

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Spiribacter

Description

Spiribacter vilamensis strain DSM 21056 is characterized by having a single replicon, which indicates a streamlined genome structure. The strain is cataloged under the accession number SHLI00000000.1, reflecting its inclusion in genomic databases for further research and analysis. This bacterium belongs to the genus Spiribacter, which is known for its unique adaptations to specific ecological niches. The presence of a single replicon suggests a potentially efficient replication process, which may contribute to its survival in its native habitat. While specific ecological roles or interactions of Spiribacter vilamensis are not detailed, species within the Spiribacter genus are often associated with aquatic environments, where they may play roles in nutrient cycling or microbial community dynamics. Understanding the genomic features of Spiribacter vilamensis, such as its single replicon, can provide insights into its evolutionary adaptations and ecological functions. Further studies may reveal the specific environmental conditions that favor its growth and the ecological implications of its presence within microbial communities. Overall, the genomic simplicity of this strain may be indicative of specialized life strategies, making it a subject of interest for studies on microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusSpiribacter
SpeciesSpiribacter vilamensis
Strainstrain DSM 21056

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of a hypersaline lake located in Laguna Vilama, Argentina
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiribacter vilamensis strain DSM 21056 Ga0310522_12, whole genome

Gene Summary

Adenine Count

370600 bp

Thymine Count

372396 bp

Guanine Count

667060 bp

Cytosine Count

665965 bp

Genome Length

2076021 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized protein duf4390EV698_1762Not AvailableNegative1748587 - 174917422617.0
16s rrna m(5)c-967 methyltransferaseEV698_1763Not AvailableNegative1749140 - 175045347549.8
peptide deformylaseEV698_1765Not AvailableNegative1751387 - 175192020194.0
hypothetical proteinEV698_1766Not AvailablePositive1752039 - 175244014467.7
dna protecting protein dpraEV698_1767Not AvailablePositive1752433 - 175358440188.9
smg proteinEV698_1768Not AvailablePositive1753581 - 175405417932.5
dna topoisomerase-1EV698_1769Not AvailablePositive1754061 - 175647589844.0
l-threonylcarbamoyladenylate synthaseEV698_1770Not AvailablePositive1756477 - 175705220324.8
molybdopterin synthase subunit moaeEV698_1771Not AvailableNegative1757049 - 175748315327.0
coproporphyrinogen oxidaseEV698_1772Not AvailablePositive1757562 - 175849435401.2

Displaying genes 1741 – 1750 of 2035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.