Spiribacter vilamensis strain DSM 21056

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Spiribacter

Description

Spiribacter vilamensis strain DSM 21056 is characterized by having a single replicon, which indicates a streamlined genome structure. The strain is cataloged under the accession number SHLI00000000.1, reflecting its inclusion in genomic databases for further research and analysis. This bacterium belongs to the genus Spiribacter, which is known for its unique adaptations to specific ecological niches. The presence of a single replicon suggests a potentially efficient replication process, which may contribute to its survival in its native habitat. While specific ecological roles or interactions of Spiribacter vilamensis are not detailed, species within the Spiribacter genus are often associated with aquatic environments, where they may play roles in nutrient cycling or microbial community dynamics. Understanding the genomic features of Spiribacter vilamensis, such as its single replicon, can provide insights into its evolutionary adaptations and ecological functions. Further studies may reveal the specific environmental conditions that favor its growth and the ecological implications of its presence within microbial communities. Overall, the genomic simplicity of this strain may be indicative of specialized life strategies, making it a subject of interest for studies on microbial ecology and evolution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusSpiribacter
SpeciesSpiribacter vilamensis
Strainstrain DSM 21056

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsediment of a hypersaline lake located in Laguna Vilama, Argentina
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiribacter vilamensis strain DSM 21056 Ga0310522_12, whole genome

Gene Summary

Adenine Count

370600 bp

Thymine Count

372396 bp

Guanine Count

667060 bp

Cytosine Count

665965 bp

Genome Length

2076021 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylenetetrahydrofolate dehydrogenase (nadp+)/methenyltetrahydrofolate cyclohydrolaseEV698_1213Not AvailablePositive1214423 - 121527730235.2
dna replication and repair protein radaEV698_1214Not AvailableNegative1215274 - 121666549080.1
alanine racemaseEV698_1215Not AvailableNegative1216652 - 121774639040.1
primary replicative dna helicaseEV698_1216Not AvailableNegative1217743 - 121912850509.0
lsu ribosomal protein l9pEV698_1217Not AvailableNegative1219145 - 121959415744.6
hypothetical proteinEV698_1218Not AvailableNegative1219628 - 122049430453.5
ssu ribosomal protein s18pEV698_1219Not AvailableNegative1220522 - 12207468823.72
restart primosome assembly protein pribEV698_1220Not AvailableNegative1220759 - 122106411080.2
ssu ribosomal protein s6pEV698_1221Not AvailableNegative1221073 - 122148915852.5
23s rrna gm-2251 2'-o-methyltransferaseEV698_1222Not AvailableNegative1221602 - 122235126891.3

Displaying genes 1201 – 1210 of 2035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.