Edaphobacter modestus strain DSM 18101

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Terriglobia

Order

Terriglobales

Family

Acidobacteriaceae

Genus

Edaphobacter

Description

Edaphobacter modestus strain DSM 18101 is a mesophilic bacterium with an optimal growth temperature of 29°C. This temperature range indicates that it thrives in moderate thermal conditions, which is typical for many soil-dwelling microorganisms. The strain possesses a single replicon, suggesting a streamlined genetic structure which may contribute to its adaptability in various environments. The strain is cataloged under accession number SHKW00000000.1, providing a reference for researchers interested in its genetic and functional characteristics. While specific metabolic pathways or ecological roles are not detailed, the classification of Edaphobacter species often correlates with soil environments where they may play a role in nutrient cycling and organic matter decomposition. The mesophilic nature of Edaphobacter modestus suggests that it may be well-suited for interactions within temperate soils, contributing to the microbial community dynamics. Its optimal growth at 29°C aligns with typical soil temperatures in many regions, which may facilitate its role in soil health and function. Understanding the traits of Edaphobacter modestus can enhance our knowledge of microbial ecology in soil environments, particularly in relation to nutrient turnover and organic matter degradation.

Taxonomy

KingdomPseudomonadati
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusEdaphobacter
SpeciesEdaphobacter modestus
Strainstrain DSM 18101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Edaphobacter modestus strain DSM 18101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Edaphobacter modestus strain DSM 18101 Ga0242575_18, whole genome

Gene Summary

Adenine Count

1594229 bp

Thymine Count

1599753 bp

Guanine Count

2130443 bp

Cytosine Count

2120690 bp

Genome Length

7445115 bp

Protein-coding Genes

6092 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate permeaseBDD14_4010Not AvailableNegative4491468 - 449273646284.4
3-oxoacyl-[acyl-carrier protein] reductaseBDD14_4011Not AvailableNegative4492848 - 449359126370.6
putative cxxch cytochrome family proteinBDD14_4012Not AvailablePositive4493848 - 449609782901.1
putative dehydrogenaseBDD14_4013Not AvailablePositive4496245 - 449765752049.0
quinoprotein glucose dehydrogenaseBDD14_4014Not AvailablePositive4497717 - 449997882532.1
glucose 1-dehydrogenase/3-oxoacyl-[acyl-carrier protein] reductaseBDD14_4015Not AvailableNegative4500048 - 450080326879.4
2-deoxy-d-gluconate 3-dehydrogenaseBDD14_4016Not AvailableNegative4500880 - 450165928115.7
inosose dehydrataseBDD14_4017Not AvailablePositive4501973 - 450288433293.0
iclr family transcriptional regulatorBDD14_4018Not AvailablePositive4502897 - 450369729050.2
gluconolactonaseBDD14_4019Not AvailablePositive4503863 - 450489137638.8

Displaying genes 3751 – 3760 of 6183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.