Edaphobacter modestus strain DSM 18101

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Terriglobia

Order

Terriglobales

Family

Acidobacteriaceae

Genus

Edaphobacter

Description

Edaphobacter modestus strain DSM 18101 is a mesophilic bacterium with an optimal growth temperature of 29°C. This temperature range indicates that it thrives in moderate thermal conditions, which is typical for many soil-dwelling microorganisms. The strain possesses a single replicon, suggesting a streamlined genetic structure which may contribute to its adaptability in various environments. The strain is cataloged under accession number SHKW00000000.1, providing a reference for researchers interested in its genetic and functional characteristics. While specific metabolic pathways or ecological roles are not detailed, the classification of Edaphobacter species often correlates with soil environments where they may play a role in nutrient cycling and organic matter decomposition. The mesophilic nature of Edaphobacter modestus suggests that it may be well-suited for interactions within temperate soils, contributing to the microbial community dynamics. Its optimal growth at 29°C aligns with typical soil temperatures in many regions, which may facilitate its role in soil health and function. Understanding the traits of Edaphobacter modestus can enhance our knowledge of microbial ecology in soil environments, particularly in relation to nutrient turnover and organic matter degradation.

Taxonomy

KingdomPseudomonadati
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusEdaphobacter
SpeciesEdaphobacter modestus
Strainstrain DSM 18101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Edaphobacter modestus strain DSM 18101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Edaphobacter modestus strain DSM 18101 Ga0242575_18, whole genome

Gene Summary

Adenine Count

1594229 bp

Thymine Count

1599753 bp

Guanine Count

2130443 bp

Cytosine Count

2120690 bp

Genome Length

7445115 bp

Protein-coding Genes

6092 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s19pBDD14_2132Not AvailableNegative2400773 - 240105710591.8
lsu ribosomal protein l2pBDD14_2133Not AvailableNegative2401184 - 240200829794.0
lsu ribosomal protein l23pBDD14_2134Not AvailableNegative2402135 - 240242811107.7
lsu ribosomal protein l4pBDD14_2135Not AvailableNegative2402428 - 240310224568.7
large subunit ribosomal protein l3BDD14_2136Not AvailableNegative2403259 - 240399926159.9
ssu ribosomal protein s10pBDD14_2137Not AvailableNegative2404091 - 240440811872.6
translation elongation factor 1a (ef-1a/ef-tu)BDD14_2138Not AvailableNegative2404478 - 240566543443.2
translation elongation factor 2 (ef-2/ef-g)BDD14_2139Not AvailableNegative2405738 - 240778974886.0
ssu ribosomal protein s7pBDD14_2140Not AvailableNegative2407925 - 240839517566.4
ssu ribosomal protein s12pBDD14_2141Not AvailableNegative2408480 - 240886314039.2

Displaying genes 1971 – 1980 of 6183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.