Edaphobacter modestus strain DSM 18101

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Terriglobia

Order

Terriglobales

Family

Acidobacteriaceae

Genus

Edaphobacter

Description

Edaphobacter modestus strain DSM 18101 is a mesophilic bacterium with an optimal growth temperature of 29°C. This temperature range indicates that it thrives in moderate thermal conditions, which is typical for many soil-dwelling microorganisms. The strain possesses a single replicon, suggesting a streamlined genetic structure which may contribute to its adaptability in various environments. The strain is cataloged under accession number SHKW00000000.1, providing a reference for researchers interested in its genetic and functional characteristics. While specific metabolic pathways or ecological roles are not detailed, the classification of Edaphobacter species often correlates with soil environments where they may play a role in nutrient cycling and organic matter decomposition. The mesophilic nature of Edaphobacter modestus suggests that it may be well-suited for interactions within temperate soils, contributing to the microbial community dynamics. Its optimal growth at 29°C aligns with typical soil temperatures in many regions, which may facilitate its role in soil health and function. Understanding the traits of Edaphobacter modestus can enhance our knowledge of microbial ecology in soil environments, particularly in relation to nutrient turnover and organic matter degradation.

Taxonomy

KingdomPseudomonadati
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusEdaphobacter
SpeciesEdaphobacter modestus
Strainstrain DSM 18101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Edaphobacter modestus strain DSM 18101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Edaphobacter modestus strain DSM 18101 Ga0242575_18, whole genome

Gene Summary

Adenine Count

1594229 bp

Thymine Count

1599753 bp

Guanine Count

2130443 bp

Cytosine Count

2120690 bp

Genome Length

7445115 bp

Protein-coding Genes

6092 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative intracellular protease/amidaseBDD14_1184Not AvailableNegative1350784 - 135159629376.0
hypothetical proteinBDD14_1186Not AvailablePositive1352504 - 135298616275.5
hypothetical proteinBDD14_1187Not AvailablePositive1353162 - 135379721676.4
hypothetical proteinBDD14_1188Not AvailableNegative1353985 - 135511240182.1
gtp cyclohydrolase iBDD14_1189Not AvailableNegative1355502 - 135611022993.0
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthaseBDD14_1190Not AvailableNegative1356126 - 135655416016.5
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthaseBDD14_1191Not AvailableNegative1356551 - 135696416082.0
cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferaseBDD14_1192Not AvailableNegative1357007 - 135808340229.6
thiol-disulfide isomerase/thioredoxinBDD14_1193Not AvailablePositive1358115 - 135860018004.8
fr47-like proteinBDD14_1194Not AvailablePositive1358611 - 135929424931.2

Displaying genes 1081 – 1090 of 6183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.