Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | EXX06_00375 | Not Available | Positive | 66315 - 67406 | 39669.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | EXX06_00380 | Not Available | Positive | 68249 - 71134 | 100446.0 |
| pts-dependent dihydroxyacetone kinase operon transcriptional regulator dhar | EXX06_00385 | Not Available | Negative | 71234 - 73153 | 70560.9 |
| dihydroxyacetone kinase subunit dhak | EXX06_00390 | Not Available | Positive | 73381 - 74451 | 38216.4 |
| dihydroxyacetone kinase adp-binding subunit dhal | EXX06_00395 | Not Available | Positive | 74462 - 75094 | 22632.1 |
| dihydroxyacetone kinase subunit dham | EXX06_00400 | Not Available | Positive | 75105 - 76523 | 51559.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 76502 - 76878 | Not Available |
| alpha,alpha-trehalase | EXX06_00405 | Not Available | Positive | 76843 - 78540 | 63737.1 |
| iron abc transporter substrate-binding protein | EXX06_00415 | Not Available | Positive | 78871 - 79893 | 37727.5 |
| iron abc transporter permease | EXX06_00420 | Not Available | Positive | 79893 - 80873 | 34746.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





