Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX06_06545 | Not Available | Positive | 1308069 - 1308401 | 12299.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | EXX06_06550 | Not Available | Positive | 1308398 - 1309132 | 27623.7 |
| hypothetical protein | EXX06_06570 | Not Available | Positive | 1310169 - 1310378 | 8097.38 |
| hypothetical protein | EXX06_06575 | Not Available | Positive | 1310438 - 1310647 | 8456.86 |
| response regulator transcription factor | EXX06_06580 | Not Available | Positive | 1310602 - 1311234 | 23385.6 |
| lytic transglycosylase domain-containing protein | EXX06_06585 | Not Available | Negative | 1311253 - 1311756 | 19306.8 |
| hypothetical protein | EXX06_06590 | Not Available | Negative | 1311839 - 1312057 | 8076.32 |
| hila family transcriptional regulator ygeh | EXX06_06595 | Not Available | Negative | 1312225 - 1313601 | 52585.5 |
| tetratricopeptide repeat protein | EXX06_06600 | Not Available | Negative | 1313936 - 1314427 | 18875.9 |
| hypothetical protein | EXX06_06605 | Not Available | Negative | 1314652 - 1315143 | 18550.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





