Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtcb family protein | EXX06_05880 | Not Available | Positive | 1167760 - 1168986 | 45181.4 |
| rna 3'-terminal phosphate cyclase | EXX06_05885 | Not Available | Positive | 1168990 - 1170018 | 36413.2 |
| gnat family n-acetyltransferase | EXX06_05890 | Not Available | Negative | 1170068 - 1170553 | 17651.6 |
| duf1778 domain-containing protein | EXX06_05895 | Not Available | Negative | 1170544 - 1170822 | 10407.5 |
| hth-type transcriptional regulator malt | EXX06_05900 | Not Available | Negative | 1170889 - 1173594 | 103022.0 |
| maltodextrin phosphorylase | EXX06_05905 | Not Available | Positive | 1174206 - 1176599 | 90527.4 |
| 4-alpha-glucanotransferase | EXX06_05910 | Not Available | Positive | 1176609 - 1178693 | 78491.6 |
| gluconate transporter | EXX06_05915 | Not Available | Negative | 1178738 - 1180054 | 45969.6 |
| iron-sulfur cluster biogenesis protein nfua | EXX06_05920 | Not Available | Negative | 1180415 - 1180990 | 20998.9 |
| dna utilization protein gntx | EXX06_05925 | Not Available | Negative | 1181049 - 1181732 | 25797.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





