Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn(ii)/cd(ii)/pb(ii) translocating p-type atpase znta | EXX06_05630 | Not Available | Negative | 1112730 - 1114928 | 76709.2 |
| lysoplasmalogenase | EXX06_05635 | Not Available | Negative | 1115002 - 1115628 | 23791.9 |
| duf2500 domain-containing protein | EXX06_05640 | Not Available | Positive | 1115769 - 1116128 | 13529.4 |
| duf1145 family protein | EXX06_05645 | Not Available | Negative | 1116131 - 1116400 | 10280.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | EXX06_05650 | Not Available | Negative | 1116390 - 1116986 | 21678.8 |
| signal recognition particle-docking protein ftsy | EXX06_05655 | Not Available | Positive | 1117136 - 1118632 | 54762.6 |
| cell division atp-binding protein ftse | EXX06_05660 | Not Available | Positive | 1118635 - 1119303 | 24440.8 |
| cell division protein ftsx | EXX06_05665 | Not Available | Positive | 1119296 - 1120354 | 38545.9 |
| rna polymerase sigma factor rpoh | EXX06_05670 | Not Available | Positive | 1120599 - 1121453 | 32470.6 |
| branched-chain amino acid abc transporter substrate-binding protein | EXX06_05675 | Not Available | Positive | 1121724 - 1122827 | 39078.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





