Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXX06_05050 | Not Available | Positive | 988592 - 990199 | 60280.8 |
| dipeptide abc transporter permease dppb | EXX06_05060 | Not Available | Positive | 990507 - 991526 | 37499.4 |
| dipeptide abc transporter permease dppc | EXX06_05065 | Not Available | Positive | 991536 - 992438 | 32310.5 |
| dipeptide abc transporter atp-binding protein | EXX06_05070 | Not Available | Positive | 992449 - 993432 | 35846.5 |
| abc transporter atp-binding protein | EXX06_05075 | Not Available | Positive | 993429 - 994433 | 37520.6 |
| haaap family serine/threonine permease | EXX06_05080 | Not Available | Negative | 994463 - 995734 | 47303.4 |
| type i toxin-antitoxin system toxin ldr family protein | EXX06_05085 | Not Available | Positive | 996210 - 996317 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | EXX06_05090 | Not Available | Positive | 996693 - 996800 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | EXX06_05100 | Not Available | Positive | 997176 - 997283 | 3882.93 |
| cellulose biosynthesis protein bcsg | EXX06_05105 | Not Available | Negative | 997370 - 999049 | 62019.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





