Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | EXX06_04950 | Not Available | Positive | 966891 - 967802 | 34718.2 |
| glycine--trna ligase subunit beta | EXX06_04955 | Not Available | Positive | 967812 - 969881 | 76789.1 |
| type i toxin-antitoxin system toxin hoka | EXX06_04960 | Not Available | Positive | 970124 - 970261 | 5229.56 |
| rna chaperone/antiterminator cspa | EXX06_04965 | Not Available | Negative | 970449 - 970661 | 7403.66 |
| hth-type transcriptional regulator | EXX06_04970 | Not Available | Negative | 970942 - 971232 | 11033.5 |
| duf3053 domain-containing protein | EXX06_04975 | Not Available | Positive | 971666 - 972376 | 25664.5 |
| glyoxylate/hydroxypyruvate reductase ghrb | EXX06_04980 | Not Available | Negative | 972426 - 973400 | 35410.5 |
| ompa family lipoprotein | EXX06_04985 | Not Available | Negative | 973504 - 974163 | 22198.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | EXX06_04990 | Not Available | Positive | 974316 - 976649 | 85810.3 |
| n-acetyltransferase | EXX06_04995 | Not Available | Negative | 976618 - 977058 | 17148.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





