Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose operon transcription regulator xylr | EXX06_04900 | Not Available | Negative | 956052 - 957230 | 44871.7 |
| xylose abc transporter permease | EXX06_04905 | Not Available | Negative | 957308 - 958489 | 41033.5 |
| d-xylose abc transporter atp-binding protein | EXX06_04910 | Not Available | Negative | 958467 - 960008 | 56443.9 |
| d-xylose abc transporter substrate-binding protein | EXX06_04915 | Not Available | Negative | 960086 - 961078 | 35722.0 |
| xylose isomerase | EXX06_04920 | Not Available | Positive | 961444 - 962766 | 49721.7 |
| xylulokinase | EXX06_04925 | Not Available | Positive | 962838 - 964292 | 52652.2 |
| hypothetical protein | EXX06_04930 | Not Available | Positive | 964461 - 964802 | 12553.0 |
| yiab family inner membrane protein | EXX06_04935 | Not Available | Positive | 964848 - 965285 | 16123.6 |
| acyltransferase | EXX06_04940 | Not Available | Negative | 965327 - 966322 | 37634.2 |
| hypothetical protein | EXX06_04945 | Not Available | Positive | 966497 - 966796 | 11324.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





