Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX06_04675 | Not Available | Negative | 907883 - 908080 | 7320.16 |
| rhodanese-like domain-containing protein | EXX06_04680 | Not Available | Positive | 908104 - 908535 | 15597.2 |
| glutaredoxin 3 | EXX06_04685 | Not Available | Positive | 908677 - 908928 | 9138.01 |
| protein-export chaperone secb | EXX06_04690 | Not Available | Positive | 908991 - 909458 | 17292.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | EXX06_04695 | Not Available | Positive | 909458 - 910477 | 36363.8 |
| serine o-acetyltransferase | EXX06_04700 | Not Available | Positive | 910557 - 911378 | 29362.4 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | EXX06_04705 | Not Available | Negative | 911431 - 911904 | 17672.2 |
| alpha-hydroxy-acid oxidizing protein | EXX06_04710 | Not Available | Negative | 912090 - 913280 | 42716.6 |
| transcriptional regulator lldr | EXX06_04715 | Not Available | Negative | 913277 - 914053 | 29167.9 |
| l-lactate permease | EXX06_04720 | Not Available | Negative | 914053 - 915708 | 59203.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





