Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase domain-containing protein | EXX06_04625 | Not Available | Positive | 896102 - 897355 | 47358.2 |
| lipopolysaccharide heptosyltransferase rfac | EXX06_04630 | Not Available | Negative | 897403 - 898362 | 35507.8 |
| adp-heptose--lps heptosyltransferase rfaf | EXX06_04635 | Not Available | Negative | 898366 - 899412 | 39046.4 |
| adp-glyceromanno-heptose 6-epimerase | EXX06_04640 | Not Available | Negative | 899422 - 900354 | 34896.0 |
| glycine c-acetyltransferase | EXX06_04645 | Not Available | Positive | 900568 - 901764 | 43133.6 |
| l-threonine 3-dehydrogenase | EXX06_04650 | Not Available | Positive | 901774 - 902799 | 37257.3 |
| glycosyltransferase | EXX06_04655 | Not Available | Positive | 903038 - 904072 | 40478.5 |
| divergent polysaccharide deacetylase family protein | EXX06_04660 | Not Available | Negative | 904059 - 905018 | 35396.8 |
| murein hydrolase activator envc | EXX06_04665 | Not Available | Negative | 905022 - 906305 | 47469.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | EXX06_04670 | Not Available | Negative | 906315 - 907859 | 56160.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





