Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase anchor subunit | EXX06_04210 | Not Available | Negative | 832399 - 833253 | 30488.5 |
| dimethylsulfoxide reductase subunit b | EXX06_04215 | Not Available | Negative | 833255 - 833872 | 22752.9 |
| dimethyl sulfoxide reductase subunit a | EXX06_04220 | Not Available | Negative | 833883 - 836306 | 90006.0 |
| dimethyl sulfoxide reductase subunit a | EXX06_04225 | Not Available | Negative | 836367 - 838793 | 89713.9 |
| duf1161 domain-containing protein | EXX06_04230 | Not Available | Negative | 838992 - 839297 | 10491.3 |
| ynfc family lipoprotein | EXX06_04235 | Not Available | Positive | 839405 - 840115 | 26508.3 |
| spermidine n1-acetyltransferase | EXX06_04240 | Not Available | Negative | 840118 - 840678 | 21902.3 |
| duf1283 family protein | EXX06_04245 | Not Available | Negative | 840713 - 841054 | 12943.4 |
| ynfa family protein | EXX06_04250 | Not Available | Positive | 841189 - 841539 | 12923.4 |
| starvation-sensing protein rspa | EXX06_04255 | Not Available | Positive | 841720 - 842934 | 45971.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





