Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1421564 bp
Thymine Count
1410519 bp
Guanine Count
1433058 bp
Cytosine Count
1445522 bp
Genome Length
5711198 bp
Protein-coding Genes
5016 genes
Non-Coding Genes
485 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX06_03145 | Not Available | Negative | 618270 - 618368 | 3458.45 |
| diguanylate cyclase dgcp | EXX06_03150 | Not Available | Negative | 618401 - 619426 | 38521.8 |
| duf333 domain-containing protein | EXX06_03155 | Not Available | Positive | 619609 - 619863 | 8928.84 |
| duf488 domain-containing protein | EXX06_03160 | Not Available | Negative | 619885 - 620232 | 13401.0 |
| 2-nitroimidazole transporter | EXX06_03165 | Not Available | Negative | 620287 - 621468 | 41255.9 |
| arac family transcriptional regulator | EXX06_03170 | Not Available | Positive | 621565 - 622386 | 30472.2 |
| duf441 domain-containing protein | EXX06_03175 | Not Available | Negative | 622343 - 622789 | 15256.6 |
| hypothetical protein | EXX06_03180 | Not Available | Positive | 622959 - 623063 | 3771.77 |
| mischarged aminoacyl-trna deacylase | EXX06_03185 | Not Available | Negative | 623064 - 623567 | 17851.7 |
| ggdef domain-containing protein | EXX06_03190 | Not Available | Negative | 623564 - 625099 | 58319.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





