Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EXX13_27790 | Not Available | Positive | 5541791 - 5541919 | 5063.81 |
| hlyd family secretion protein | EXX13_27795 | Not Available | Positive | 5542149 - 5543390 | 47378.9 |
| peptidase domain-containing abc transporter | EXX13_27800 | Not Available | Positive | 5543365 - 5545479 | 79062.3 |
| cupin fold metalloprotein, wbuc family | EXX13_27815 | Not Available | Positive | 5548050 - 5548382 | 12100.3 |
| class a extended-spectrum beta-lactamase ctx-m-15 | EXX13_27820 | Not Available | Negative | 5548429 - 5549304 | 31145.4 |
| d-serine ammonia-lyase | EXX13_27825 | Not Available | Negative | 5549430 - 5550223 | 28927.6 |
| d-serine transporter dsdx | EXX13_27830 | Not Available | Negative | 5550241 - 5551578 | 47140.1 |
| dna-binding transcriptional regulator dsdc | EXX13_27835 | Not Available | Positive | 5551796 - 5552740 | 35741.5 |
| rhs repeat protein | EXX13_27850 | Not Available | Negative | 5553205 - 5554098 | 33388.0 |
| protein yhhh | EXX13_27860 | Not Available | Negative | 5555087 - 5555470 | 14545.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





