Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXX13_26440 | Not Available | Negative | 5342343 - 5344118 | 67155.8 |
| hypothetical protein | EXX13_26445 | Not Available | Negative | 5344520 - 5345272 | 27582.9 |
| xre family transcriptional regulator | EXX13_26450 | Not Available | Positive | 5345390 - 5345854 | 17013.3 |
| hypothetical protein | EXX13_26455 | Not Available | Positive | 5346030 - 5346902 | 32256.5 |
| hypothetical protein | EXX13_26460 | Not Available | Positive | 5347261 - 5348871 | 60418.6 |
| ghot/ortt family toxin | EXX13_26465 | Not Available | Positive | 5348938 - 5349117 | 6643.48 |
| helix-turn-helix domain-containing protein | EXX13_26470 | Not Available | Positive | 5349463 - 5350212 | 28286.4 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | EXX13_26475 | Not Available | Positive | 5350209 - 5351912 | 62739.4 |
| yopn/lcre/inve/mxic type iii secretion system gatekeeper | EXX13_26480 | Not Available | Positive | 5351917 - 5353062 | 43578.7 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | EXX13_26485 | Not Available | Positive | 5353055 - 5355115 | 76395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





