Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC_11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1403876 bp
Thymine Count
1403803 bp
Guanine Count
1425476 bp
Cytosine Count
1394297 bp
Genome Length
5627615 bp
Protein-coding Genes
5194 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | EXX13_01305 | Not Available | Negative | 278024 - 279130 | 41003.8 |
| nudix hydrolase | EXX13_01310 | Not Available | Negative | 279184 - 279645 | 17433.8 |
| 23s rrna pseudouridine(2457) synthase rlue | EXX13_01315 | Not Available | Negative | 279655 - 280308 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | EXX13_01320 | Not Available | Positive | 280480 - 281730 | 45772.4 |
| anti-adapter protein iram | EXX13_01325 | Not Available | Negative | 281833 - 282156 | 12122.1 |
| hypothetical protein | EXX13_01330 | Not Available | Negative | 282689 - 282799 | 4207.46 |
| duf1398 domain-containing protein | EXX13_01335 | Not Available | Negative | 282852 - 283256 | 15828.0 |
| helix-turn-helix-type transcriptional regulator | EXX13_01340 | Not Available | Negative | 283477 - 284208 | 28222.1 |
| blue light-responsive regulator bluf | EXX13_01345 | Not Available | Negative | 284413 - 285624 | 45332.5 |
| two-component-system connector protein ycgz | EXX13_01350 | Not Available | Positive | 285938 - 286174 | 8720.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





